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Leiden, The Netherlands, August 29 - September 1, 2010
Note: Registration is closed.
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| DATE | 8:30-9:00 | 9:00-12:30 | 12:30-13:30 | 13:30-17:00 | 17:00-19:00 | 19:00 |
| 08/29/10 | Registration from 12:00 | Registration | Hands-on workshops | |||
| 08/30/10 | coffee | Registration and Oral session 1 | Lunch | Oral session 2 | Posters & Drinks | |
| 08/31/10 | coffee | Oral session 3 | Lunch | Oral session 4 | Posters & Drinks | Dinner |
| 09/01/10 | coffee | Oral session 5 | Lunch | New Technology Sponsored Talks |
| 9:00-9:30 | Evolutionary insights from the 1000 Genomes Project: Chris Tyler-Smith, The Wellcome Trust Sanger Institute, Hinxton, UK |
| 9:30-9:50 | Ancient DNA research without PCR: the power of single molecule sequencing: Eveline Altena, Leiden University Medical Center, Leiden, NL |
| 9:50-10:20 | Hunting the Molecular Past: Eske Willerslev, Ancient DNA and Evolution Group, Department of Biology, Univ of Copenhagen, Denmark |
| 11:00-11:30 | Evolution of transcriptional control in mammals: Mike Wilson, Cancer Research UK, Cambridge Research Institute Department of Oncology, University of Cambridge, UK |
| 11:30-11:50 | Nucleolar association of DNA: Marek Gierlinski, University of Dundee, Dundee, UK |
| 11:50-12:10 | Pol II ChIP-seq as a measure of gene transcription rate: Michal Mokry, Hubrecht Institute, Utrecht, NL |
| 12:10-12:30 | Linking genomic variation to differences in transcriptomes: Marieke Simonis, Hubrecht Institute, Utrecht, NL |
| 13:30-14:00 | Tag-based transcript sequencing: Comparison of SAGE and CAGE: Matthias Harbers, DNAFORM Inc., Japan |
| 14:00-14:20 | The small transcriptome of prostate cancer: Elena S. Martens-Uzunova, Erasmus MC, Rotterdam, NL |
| 14:20-14:40 | Next generation sequencing-based mRNA profiling of total blood in a large human cohort: Peter-Bram 't Hoen, Leiden University Medical Center, Leiden, NL |
| 14:40-15:00 | RNA-Seq in Ensembl: Simon White, Wellcome Trust Sanger Institute, Hinxton, UK |
| 15:00-15:30 | coffee |
| 15:30-16:00 | Mapping and quantifying mammalian transcriptomes by RNA-Seq: Barbara Wold, Division of Biology, California Institute of Technology, USA |
| 16:00-16:20 | Tracing the derivation of embryonic stem cells from the inner cell mass by single cell RNA-Seq analysis: Raimo Tanzi, Life Technologies, USA |
| 16:20-16:50 | Next-generation systems genetics: Edwin Cuppen, Hubrecht Institute, Utrecht, NL |
| 9:00-9:30 | Bacterial metagenomics: Sacha van Hijum, NIZO food research, Ede; Radboud University Medical Center, Nijmegen; and TIFN |
| 9:30-9:50 | Benefit of high throughput sequencing in virus discovery: Michel de Vries, Academic Medical Center of the University of Amsterdam, Amsterdam, NL |
| 9:50-10:10 | Multiplexed targeted genomic enrichment and next-generation sequencing for efficient mutation discovery: I.J Nijman, Hubrecht Institute, Utrecht, NL |
| 10:10-10:30 | Multiplexed amplicon sequencing of the breast cancer genes BRCA1 & 2: opportunities, challenges and limitations: Kim de Leeneer, CMGG, University Hospital Ghent, Gent, BE |
| 10:30-11:00 | coffee |
| 11:00-11:30 | The next generation of human genetics: Debbie Nickerson, Dept. of Genome Sciences, Univ of Washington, Seattle |
| 11:30-11:50 | Disease gene identification by exome sequencing: Alexander Hoischen, Radboud University Nijmegen Medical Centre, Nijmegen, NL |
| 11:50-12:20 | The 'next' of next-generation sequencing; diagnostic applications: Joris Veltman, Radboud University Nijmegen Medical Centre, Nijmegen, NL |
| 13:30-14:00 | Alignment and assembly: Ewan Birney, EBI, Hinxton, UK |
| 14:00-14:20 | Reconstructing complex plant genomes using NGS data: Erwin Datema, Wageningen University, Wageningen, NL |
| 14:20-14:40 | Context dependency in Illumina sequencing: Irina Abnizova, Wellcome Trust Sanger Institute, Hinxton, UK |
| 14:40-15:00 | Direct comparison of highly multiplexed pre-barcoded microarray and solution- based genomic enrichment of human samples: Magdalena Harakalova, University Medical Center Utrecht, Utrecht, NL |
| 15:00-15:30 | coffee |
| 15:30-16:00 | Storage and archiving: Guy Cochrane, EBI, Hinxton, UK |
| 16:00-16:20 | The vision of the Genomic Standards Consortium in today's ultra high-throughput sequencing era: Peter Sterk, Wellcome Trust Sanger Institute, Hinxton, UK |
| 16:20-16:50 | READNA - 4 Generations of Nucleic Acid Analysis: Ivo Gut, Centre Nacional d'Analisis Genomics (CNAG), Barcelona, Spain |
| 9:00-9:30 | Fast forward: genomic technologies and research ethics: Jeantine Lunshof, Faculty of Health, Medicine and Life Sciences, Maastricht University, NL |
| 9:30-9:50 | Exome sequencing identifies WDR35, encoding an IFT-A protein, as a novel gene involved in Sensenbrenner syndrome: Christian Gilissen, Radboud University Nijmegen Medical Centre, Nijmegen, NL |
| 9:50-10:10 | Exome sequencing combined with linkage-based gene prioritization strategy for identification of autosomal dominant mutations in multiplex autism families: Martin Poot, University Medical Center Utrecht, Utrecht, NL |
| 10:10-10:30 | Mate-pair sequencing reveals de novo and inherited chromosomal rearrangements in a family trio: Wigard Kloosterman, University Medical Center Utrecht, Utrecht, NL |
| 10:30-11:00 | coffee |
| 11:00-11:30 | Getting more comprehensive understanding of human genetic variation: Ruiqiang Li, Beijing Genomics Institute, Shenzhen, China |
| 11:30-11:50 | Finding the causal variant in a region of genetic association: Allan F McRae, Queensland Institute of Medical Research, Brisbane, AU |
| 11:50-12:20 | Using next-generation sequencing to understand human genome structural variation: Evan Eichler, Univ of Washington, Seattle, USA |
| 13:30-13:55 | Rapid preparation of targeted resequencing libraries from genomic and FFPE-extracted DNA using microfluidic PCR: Fiona Kaper, R&D team, Fluidigm |
| 13:55-14:20 | Single molecule real-time nucleic acid sequencing-by-synthesis using Quantum-dot (Qdot(R)) nanocrystal DNA polymerases with FRET-based detection: Manfred Lee, Genetic Systems, Life Technologies, Carlsbad CA, USA |
| 14:20-14:30 | Results of survey among European NGS users: Terry Vrijenhoek, Radboud University Nijmegen Medical Centre, Nijmegen, NL |
| 14:30-15:15 | Round table discussion on NGS in Europe - ERA-Instuments |
| 15:15-15:30 | Closing and Awards: Johan den Dunnen |